agat_sp_functional_statistics.pl

DESCRIPTION

The script aims to summerize functional information stored in the file.

SYNOPSIS

agat_sp_functional_statistics.pl --gff file.gff  [ -o outfile ]
agat_sp_functional_statistics.pl --help

OPTIONS

  • --gff or -f

    Input GTF/GFF file.

  • --gs or -g

    This option inform about the genome size in oder to compute more statistics. You can give the size in Nucleotide or directly the fasta file.

  • --output or -o

    Folder where will be written the results. [Default output_functional_statistics]

  • -h or --help

    Display this helpful text.