agat_sp_functional_statistics.pl¶
DESCRIPTION¶
The script aims to summerize functional information stored in the file.
SYNOPSIS¶
agat_sp_functional_statistics.pl --gff file.gff [ -o outfile ]
agat_sp_functional_statistics.pl --help
OPTIONS¶
--gff or -f
Input GTF/GFF file.
--gs or -g
This option inform about the genome size in oder to compute more statistics. You can give the size in Nucleotide or directly the fasta file.
--output or -o
File where will be written the result. If no output file is specified, the output will be written to STDOUT.
-h or --help
Display this helpful text.